Structure & Reactivity

Nuclear Magnetic Resonance Spectroscopy

NMR12.  Constructing Partial Structures in NMR Spectroscopy

   When you look at an IR spectrum, you immediately see little chunks of the structure, because you see individual bonds.  You know at a glance that the compound  contains a C=O bond or an O-H bond.  That can be very reassuring, because you can quickly imagine what you are dealing with.

   NMR spectra often take more work.  You may have to put pencil to paper to come up with a structure.  The work pays off, because you can get a much more detailed picture of the structure.

   Let's start with a 13C NMR spectrum.  Suppose you had peaks in the spectrum at 200, 35, 30, and 15 ppm.  We might assign these three peaks as follows:

 

Table NMR12.1. An example of a data table for 13C NMR.

shift (ppm) partial structure
200 sp2 C=O
35 sp3 C-C=O
30 sp3 C-C=O
15 sp3 C-C

 

   We are saying that the first carbon is in the sp2 or trigonal planar region, and that it is so far downfield because of a double bond to oxygen.   The other two carbons are in the sp3 or tetrahedral region.  One of them isn't very far downfield; it is probably just attached to another sp3 carbon.  The other two, at 35 and 30 ppm, are both a little further downfield.  That's around the right place for a tetrahedral carbon attached to a trigonal planar carbon; that is, these carbons are each attached to either a double bond or a carbonyl.

  In the partial structure, we always bold or underline the carbon that corresponds to the peak we are discussing. If you don't do that, it isn't clear whether the peak at 30 comes from a carbon next to the carbonyl (C=O), or the carbon in the carbonyl itself.  Also, on the peak at 15, we want to make clear that we are talking about a single carbon atom; leaving the partial structure as C-C somehow implies that this spectroscopy observes bonds, but it doesn't.  IR spectroscopy observes bonds.  13C NMR spectroscopy observes carbon atoms.

  Now, suppose we look at the 1H NMR spectrum for the same compound.  Maybe we see three peaks  this time. There is a quartet integrating for 2H at 2.3 ppm, a singlet integrating for 3H at 2.1 ppm, and a triplet integrating for 3H at 1.1 ppm.  We enter those characteristics in a table.  This time, there are three features to explain for each peak.

 

Table NMR12.2. An example of a data table for 1H NMR.

shift integ. multipl. partial structure
2.3 2H quartet CH3-CH2-C=O
2.1 3H singlet CH3-C=O
1.1 3H triplet CH3-CH2

 

   First of all, we need to explain the shift.  All of these peaks are in the upfield end of the spectrum (below 5 ppm), so they are likely from hydrogens on sp3 or tetrahedral carbons.  The first two are slightly downfield, just past 2 ppm.  That suggests that the sp3 carbons they are attached to may in turn be attached to sp2 carbons: either double bonds or carbonyls.  We already know there is a carbonyl from the 13C spectrum, so let's assume that's what is causing the shift near 2 ppm.  The third peak, at 1.1 ppm, is in the normal range; this hydrogen is on a tetrahedral carbon, likely attached to other tetrahedral carbons.

   To demonstrate what the integration is telling us, we just show the correct number of hydrogens.  There are two hydrogens responsible for the peak at 2.3 ppm.  Three others are responsible for the peak at 2.1 ppm, and another three give rise to the peak at 1.1 ppm.

   Finally, we need to explain the muliplicity.  The peak at 2.3 ppm is a quartet, so by the "n+1" rule it must be next to a CH3 group.  The peak at 1.1 ppm is a triplet, so it must be next to a CH2 group.  (It doesn't take long to figure out that these two peaks represent hydrogens that are next to each other.)  Finally, the peak at 2.1 ppm is a singlet.  It has no hydrogen neighbours at all.

   Notice we do not need to know what the structure is in order to fill in these partial structures. We are just writing down what the data is telling us.  From there, it isn't very far to determine the overall structure. 

Problem NMR12.1.

Fill in partial structures for the following peaks.

a) 10.1 ppm, 1H, triplet        b) 3.4 ppm, 1H, septet        c) 7.3 ppm, 2H, triplet

d) 5.4 ppm, 1H, quartet        e)  1.4 ppm, 2H, sextet        f)  8.0 ppm, 1H, singlet

g)  2.1 ppm, 3H, singlet        h)  6.8 ppm, 2H, doublet      i)  0.9 ppm, 6H, doublet

 

Problem NMR12.2.

Identify the errors in the following partial structures:

a)  3.6 ppm, 2H, triplet, CH2-CH2            b) 2.1 ppm, 2H, singlet, CH3-C=C

c)  7.4 ppm, 2H, doublet, CH=CH2-C       d) 1.8 ppm, 2H, quintet, CH2-CH4

e)  7.8 ppm, 1H, triplet, -CH=CH2            f)  1.7 ppm, 1H, nonet, NH2-CH(CH3)2

 

Once we have worked out partial structures, putting the entire structure together is like putting a jigsaw puzzle together.  We just need to find which pieces fit together.  The partial stucture shows what each group is attached to, so we can use that information to put things together.  Using the information in the complete proton table shown above, we first choose one entry and re-write it where we are going to build up the structure.  Put a check or an X beside the entry in the table as a reminder that we have already put this piece in the final structure. 

Figure NMR12.1. Fitting together two partial structures to make a bigger structure.

 

 Look at the group that the first unit is attached to.  In a partial structure, that's already shown, because the partial structure shows both a set of hydrogens and the hydrogens next to them.  In this case, that's the CH3 attached to the CH2.  Locate that CH3 group in the table.  Mark it off because we already have it in the structure.  

Figure NMR12.2. Fitting together another partial structure to make a bigger structure.

 

Sometimes, that next piece will show us another attachment, but this time we have reaches the end of the chain.  This carbon can't form any more bonds.  However, if we look at the right hand side of our structure, we see a carbonyl that still has room for one more bond.  We can look in the table and see whether there is a sign of a carbonyl attached to anything else.  Once we bring that piece in, the structure is complete.

Figure NMR12.3. Fitting together another partial structure to finish building the structure.

 

Let's try another example.  Suppose we have the four partial structures shown below.  Like before, we will select a partial structure from our list of partial structures and place it where we want to build the entire structure.

Figure NMR12.4. Fitting together two partial structures to make a bigger structure.

 

 Next, we find the piece that it is connected to and add that one into the structure.  We are looking for a second CH2 group.  We will place that piece into the structure as well.

Figure NMR12.5. Fitting together another partial structure to make a bigger structure.

 

 At this point, we have reached the end of the chain on the left side.  We need to see whether there is anything else connected to the oxygen and bring that piece into the structure.

Figure NMR12.6. Fitting together another partial structure to finish building the structure.

 

Problem NMR12.3.

Put the partial structures together to make the whole structure.

 

This site is written and maintained by Chris P. Schaller, Ph.D., College of Saint Benedict / Saint John's University (with contributions from other authors as noted).  It is freely available for educational use.

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Structure & Reactivity in Organic, Biological and Inorganic Chemistry by Chris Schaller is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License

Send corrections to cschaller@csbsju.edu

 

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